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sc::DiscreteConnollyShape Member List

This is the complete list of members for sc::DiscreteConnollyShape, including all inherited members.
_shapes (defined in sc::UnionShape)sc::UnionShape [protected]
actual_gradient_accuracy() const (defined in sc::Function)sc::Function [virtual]
actual_hessian_accuracy() const (defined in sc::Function)sc::Function [virtual]
actual_value_accuracy() constsc::Function [virtual]
add_shape(Ref< Shape >) (defined in sc::UnionShape)sc::UnionShape
boundingbox(double valuemin, double valuemax, SCVector3 &p1, SCVector3 &p2) (defined in sc::UnionShape)sc::UnionShape [virtual]
change_coordinates()sc::Function [virtual]
class_desc() constsc::DescribedClass
class_name() constsc::DescribedClass
class_version() constsc::DescribedClass
compute()sc::Shape [virtual]
Compute() (defined in sc::Compute)sc::Compute
dereference()sc::RefCount [inline]
DescribedClass() (defined in sc::DescribedClass)sc::DescribedClass
DescribedClass(const DescribedClass &) (defined in sc::DescribedClass)sc::DescribedClass
desired_gradient_accuracy() const (defined in sc::Function)sc::Function [virtual]
desired_hessian_accuracy() const (defined in sc::Function)sc::Function [virtual]
desired_value_accuracy() constsc::Function [virtual]
dim_sc::Function [protected]
dimension() constsc::Function
dir_restore_state(StateIn &si, const char *objectname, const char *keyword=0) (defined in sc::SavableState)sc::SavableState [static]
DiscreteConnollyShape(const Ref< KeyVal > &) (defined in sc::DiscreteConnollyShape)sc::DiscreteConnollyShape
distance_to_surface(const SCVector3 &r, SCVector3 *grad=0) const (defined in sc::UnionShape)sc::UnionShape [virtual]
do_change_coordinates(const Ref< NonlinearTransform > &)sc::Function [protected]
do_gradient(int) (defined in sc::Function)sc::Function
do_hessian(int) (defined in sc::Function)sc::Function
do_value(int)sc::Function
failure(const char *) (defined in sc::Volume)sc::Volume [protected, virtual]
Function() (defined in sc::Function)sc::Function
Function(StateIn &) (defined in sc::Function)sc::Function
Function(const Function &) (defined in sc::Function)sc::Function
Function(const Ref< KeyVal > &, double funcacc=DBL_EPSILON, double gradacc=DBL_EPSILON, double hessacc=DBL_EPSILON)sc::Function
get_gradient(SCVector3 &g) (defined in sc::Volume)sc::Volume
get_x(SCVector3 &x) (defined in sc::Volume)sc::Volume
get_x() const (defined in sc::Function)sc::Function [inline]
get_x_no_copy() const (defined in sc::Function)sc::Function [inline]
get_x_reference()sc::Function [inline, protected]
gradient() (defined in sc::Function)sc::Function [virtual]
gradient_sc::Function [protected]
gradient_implemented() const (defined in sc::UnionShape)sc::UnionShape [virtual]
gradient_needed() const (defined in sc::Function)sc::Function
gradient_result() (defined in sc::Function)sc::Function [inline]
guess_hessian(RefSymmSCMatrix &)sc::Function [virtual]
hessian() (defined in sc::Function)sc::Function [virtual]
hessian_sc::Function [protected]
hessian_implemented() const (defined in sc::Function)sc::Function [virtual]
hessian_needed() const (defined in sc::Function)sc::Function
hessian_result() (defined in sc::Function)sc::Function [inline]
identifier()sc::Identity [inline]
initialize(const Ref< Molecule > &, double probe_radius) (defined in sc::DiscreteConnollyShape)sc::DiscreteConnollyShape
interpolate(const SCVector3 &p1, const SCVector3 &p2, double val, SCVector3 &result) (defined in sc::Shape)sc::Shape [virtual]
interpolation_accuracy() (defined in sc::Volume)sc::Volume [protected]
inverse_hessian(RefSymmSCMatrix &) (defined in sc::Function)sc::Function [virtual]
is_outside(const SCVector3 &r) const (defined in sc::UnionShape)sc::UnionShape [virtual]
key_restore_state(StateIn &si, const char *keyword)sc::SavableState [static]
lock_ptr() constsc::RefCount
managed() const (defined in sc::RefCount)sc::RefCount [inline]
managed() constsc::RefCount [inline]
matrixkit() constsc::Function
matrixkit_sc::Function [protected]
nreference() constsc::RefCount [inline]
obsolete()sc::Compute [virtual]
operator=(const Function &) (defined in sc::Function)sc::Function
operator=(const SavableState &) (defined in sc::SavableState)sc::SavableState
operator=(const DescribedClass &) (defined in sc::DescribedClass)sc::DescribedClass
operator=(const RefCount &) (defined in sc::RefCount)sc::RefCount [inline, protected]
print(std::ostream &=ExEnv::out0()) constsc::Function [virtual]
RefCount() (defined in sc::RefCount)sc::RefCount [inline, protected]
RefCount(const RefCount &) (defined in sc::RefCount)sc::RefCount [inline, protected]
reference()sc::RefCount [inline]
restore_state(StateIn &si)sc::SavableState [static]
SavableState() (defined in sc::SavableState)sc::SavableState [protected]
SavableState(const SavableState &) (defined in sc::SavableState)sc::SavableState [protected]
SavableState(StateIn &)sc::SavableState [protected]
save_data_state(StateOut &)sc::Function [virtual]
save_object_state(StateOut &)sc::SavableState
save_state(StateOut &)sc::SavableState
save_state(SavableState *s, StateOut &) (defined in sc::SavableState)sc::SavableState [static]
save_vbase_state(StateOut &)sc::SavableState [virtual]
set_actual_gradient_accuracy(double) (defined in sc::Function)sc::Function [protected, virtual]
set_actual_hessian_accuracy(double) (defined in sc::Function)sc::Function [protected, virtual]
set_actual_value_accuracy(double) (defined in sc::Function)sc::Function [protected, virtual]
set_desired_gradient_accuracy(double) (defined in sc::Function)sc::Function [virtual]
set_desired_hessian_accuracy(double) (defined in sc::Function)sc::Function [virtual]
set_desired_value_accuracy(double)sc::Function [virtual]
set_dimension(const RefSCDimension &) (defined in sc::Function)sc::Function [protected, virtual]
set_gradient(const SCVector3 &g) (defined in sc::Volume)sc::Volume
set_gradient(RefSCVector &g) (defined in sc::Volume)sc::Volume [virtual]
set_hessian(RefSymmSCMatrix &) (defined in sc::Function)sc::Function [protected, virtual]
set_matrixkit(const Ref< SCMatrixKit > &)sc::Function [protected, virtual]
set_value(double) (defined in sc::Function)sc::Function [protected, virtual]
set_x(const SCVector3 &x) (defined in sc::Volume)sc::Volume
set_x(const RefSCVector &x)sc::Volume [virtual]
Shape() (defined in sc::Shape)sc::Shape
Shape(const Ref< KeyVal > &keyval) (defined in sc::Shape)sc::Shape
solve(const SCVector3 &p, const SCVector3 &grad, double value, SCVector3 &result) (defined in sc::Volume)sc::Volume [virtual]
UnionShape() (defined in sc::UnionShape)sc::UnionShape
unlock_ptr() constsc::RefCount
unmanage()sc::RefCount [inline]
use_locks(bool inVal)sc::RefCount
value()sc::Function [virtual]
value_sc::Function [protected]
value_implemented() constsc::Shape [virtual]
value_needed() constsc::Function
value_result() (defined in sc::Function)sc::Function [inline]
Volume() (defined in sc::Volume)sc::Volume
Volume(const Ref< KeyVal > &) (defined in sc::Volume)sc::Volume
x_sc::Function [protected]
~Compute() (defined in sc::Compute)sc::Compute [virtual]
~DescribedClass() (defined in sc::DescribedClass)sc::DescribedClass [virtual]
~DiscreteConnollyShape() (defined in sc::DiscreteConnollyShape)sc::DiscreteConnollyShape
~Function() (defined in sc::Function)sc::Function [virtual]
~Identity() (defined in sc::Identity)sc::Identity [virtual]
~RefCount() (defined in sc::RefCount)sc::RefCount [virtual]
~SavableState() (defined in sc::SavableState)sc::SavableState [virtual]
~Shape() (defined in sc::Shape)sc::Shape [virtual]
~UnionShape() (defined in sc::UnionShape)sc::UnionShape
~Volume() (defined in sc::Volume)sc::Volume

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